bed.parselengths¶
breaks up intervals by size
description¶
bed.parselengths separates a bed file based on user-defined size cutoffs.
usage¶
bed.parselengths ( bedfile , brks=c(0,70,140,200) , cores=1 )
arguments¶
| Main options | Description |
|---|---|
| bedfile | string defining bed file name of intervals to be parsed. |
| brks | numeric vector of fragment size break points used to parse intervals. length of vector must be > 1. |
| cores | positive integer indicating how many fragment ranges to process simultaneously. |
output¶
bed.parselengths separates a bed file based on user-defined size cutoffs into different files, the names of which will be returned.